On k-crossings and k-nestings of permutations

We introduce k-crossings and k-nestings of permutations. We show that the crossing number and the nesting number of permutations have a symmetric joint distribution. As a corollary, the number of k-noncrossing permutations is equal to the number of k-nonnesting permutations. We also provide some enumerative results for k-noncrossing permutations for some values of k

A Baxter class of a different kind, and other bijective results using tableau sequences ending with a row shape

Tableau sequences of bounded height have been central to the analysis of k-noncrossing set partitions and matchings. We show here that familes of sequences that end with a row shape are particularly compelling and lead to some interesting connections. First, we prove that hesitating tableaux of height at most two ending with a row shape are counted by Baxter numbers. This permits us to define three new Baxter classes which, remarkably, do not obviously possess the antipodal symmetry of other known Baxter classes. We then conjecture that oscillating tableau of height bounded by k ending in a row are in bijection with Young tableaux of bounded height 2k. We prove this conjecture for k at most eight by a generating function analysis. Many of our proofs are analytic in nature, so there are intriguing combinatorial bijections to be found.Comment: 10 pages, extended abstrac

Tableau sequences, open diagrams, and Baxter families

Walks on Young's lattice of integer partitions encode many objects of algebraic and combinatorial interest. Chen et al. established connections between such walks and arc diagrams. We show that walks that start at $\varnothing$, end at a row shape, and only visit partitions of bounded height are in bijection with a new type of arc diagram -- open diagrams. Remarkably two subclasses of open diagrams are equinumerous with well known objects: standard Young tableaux of bounded height, and Baxter permutations. We give an explicit combinatorial bijection in the former case.Comment: 20 pages; Text overlap with arXiv:1411.6606. This is the full version of that extended abstract. Conjectures from that work are proved in this wor

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

Crossings and nestings in four combinatorial families

The combinatorial families of matchings, set partitions, permutations and graphs can each be represented by a series of vertices along a horizontal line with arcs connecting them. Such a representation is referred to as an arc annotated sequence. A natural crossing and nesting structure arises in each of these representations, and remarkably enough, equidistribution between these two statistics has been shown for both matchings and partitions. To show this, tools such as RSK and several bijections are required. Furthermore, other useful bijections to lattice paths, and Ferrers diagrams give additional information, and aid the enumeration for each of the four families according to these two statistics

A generating tree approach to k-nonnesting arc diagrams

This thesis describes a strategy for exhaustively generating series information and enumerating combinatorial classes that can be represented using arc diagrams. We focus on k-nonnesting set partitions, permutations, matchings and tangled diagrams. Results are new functional equations, counting sequences, bijections and asymptotic results for these classes. Our key innovation is a generalized arc diagram in which arcs may have left endpoints, but not right endpoints, and our main tool is generating trees